Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX399891: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-307570' containing sample 'TRUG0086'
1 ILLUMINA (Illumina HiSeq 2000) run: 1.2M spots, 235.6M bases, 121.3Mb downloads

UUID: bb0e676b-1d62-4dce-8544-d1fcb9cb9ac2

Design: Illumina sequencing of Mycobacterium tuberculosis TRUG0086 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - CDRC Alland

PRJNA223582 • SRP034127 • All experiments • All runs

Sample: Generic sample from Mycobacterium tuberculosis TRUG0086

SAMN02381027 • SRS515083 • All experiments • All runs

Organism: Mycobacterium tuberculosis UT0085

Library:

Name: Pond-307570

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 417347.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4YIRR

material_type: DNA:DNA Somatic

product_order: PDO-2212

product_part_number: P-MCV-0001

project: G49412

research_project: RP-114

root_sample_id: SM-4Q7ZY

sample_id: SM-4YIRR

work_request: 38583

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-20 22:21:13.0	GAPipeline	RTA1.17.20	Sequencer Application 2.0.5

Runs: 1 run, 1.2M spots, 235.6M bases, 121.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1062917	1,166,417	235.6M	121.3Mb	2013-12-27

ID:: 574334

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